Bump phonopy from 4.0.1 to 4.1.0

[dependabot]

Bumps phonopy from 4.0.1 to 4.1.0.

Changelog

Sourced from phonopy's changelog.

May-25-2026: Version 4.1.0

• Analytical derivative of the dynamical matrix is now available for Gonze-Lee non-analytical term correction. The dipole-dipole derivative is implemented in Python and in the Rust backend (phonors.derivative_recip_dipole_dipole); group-velocity calculation with Gonze-Lee NAC now uses the analytical derivative by default. The finite-difference path is still available by setting GV_DELTA_Q (or --gv-delta-q). To reproduce the previous behavior (v4.0.1 and earlier), set GV_DELTA_Q = 1e-5 (the former implicit default for Gonze-Lee NAC).

Commits

• 1d0d370 Merge pull request #836 from phonopy/ci/consolidate-release-workflow
• 47f22ea Consolidate release into a single tag-triggered workflow
• 8bb2df1 Merge pull request #835 from phonopy/release
• 9c871c9 Set version 4.1.0
• 0d16803 Merge pull request #834 from phonopy/gv/default-analytic-gonze-lee
• 94a79bd Make analytic derivative the default for Gonze-Lee group velocity
• 7009db1 Merge pull request #833 from phonopy/feat/gonze-lee-derivative-rust
• b9adb0f CI update of test on windows
• 22fbfcb CI update of test on windows
• 3ed8849 Merge pull request #832 from phonopy/feat/gonze-lee-derivative-rust
• Additional commits viewable in compare view

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[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 97.90%. Comparing base (d2a6aab) to head (48488f0).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files

@@           Coverage Diff           @@
##             main     #502   +/-   ##
=======================================
  Coverage   97.90%   97.90%           
=======================================
  Files          29       29           
  Lines        2004     2004           
=======================================
  Hits         1962     1962           
  Misses         42       42           

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[jan-janssen]

      The following packages are incompatible
      ├─ dscribe =2.1.2 * is installable with the potential options
      │  ├─ dscribe 2.1.2 would require
      │  │  └─ python >=3.10,<3.11.0a0 *, which can be installed;
      │  ├─ dscribe 2.1.2 would require
      │  │  └─ python >=3.11,<3.12.0a0 *, which can be installed;
      │  ├─ dscribe 2.1.2 would require
      │  │  └─ python >=3.12,<3.13.0a0 *, which can be installed;
      │  ├─ dscribe 2.1.2 would require
      │  │  └─ python >=3.13,<3.14.0a0 *, which can be installed;
      │  └─ dscribe 2.1.2 would require
      │     └─ python_abi =3.14 *_cp314, which can be installed;
      ├─ phonopy =4.1.0 * is not installable because there are no viable options
      │  ├─ phonopy 4.1.0 would require
      │  │  └─ python_abi =3.10 *_cp310, which conflicts with any installable versions previously reported;
      │  ├─ phonopy 4.1.0 would require
      │  │  └─ python_abi =3.11 *_cp311, which conflicts with any installable versions previously reported;
      │  ├─ phonopy 4.1.0 would require
      │  │  └─ python_abi =3.12 *_cp312, which conflicts with any installable versions previously reported;
      │  └─ phonopy 4.1.0 would require
      │     └─ python_abi =3.13 *_cp313, which conflicts with any installable versions previously reported;
      └─ python =3.14 * is installable with the potential options
         ├─ python [3.14.0|3.14.1|...|3.14.5] would require
         │  └─ python_abi =3.14 *_cp314, which can be installed;
         ├─ python [3.14.0|3.14.1|...|3.14.5] would require
         │  └─ python_abi =3.14 *_cp314t, which requires
         │     └─ python =3.14 *_cp314t, which conflicts with any installable versions previously reported;
         └─ python [3.14.0rc1|3.14.0rc2|3.14.0rc3] would require
            └─ _python_rc =* *, which does not exist (perhaps a missing channel).

[dependabot]

A newer version of phonopy exists, but since this PR has been edited by someone other than Dependabot I haven't updated it. You'll get a PR for the updated version as normal once this PR is merged.

[jan-janssen]

@dependabot rebase

[dependabot]

Looks like this PR has been edited by someone other than Dependabot. That means Dependabot can't rebase it - sorry!

If you're happy for Dependabot to recreate it from scratch, overwriting any edits, you can request @dependabot recreate.

[jan-janssen]

@dependabot recreate

[dependabot]

Looks like phonopy is up-to-date now, so this is no longer needed.