Name		Name	Last commit message	Last commit date
R		R
config		config
pipeline_data/vcf		pipeline_data/vcf
README.md		README.md
Snakefile		Snakefile
sample_names.csv		sample_names.csv
versions.txt		versions.txt

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omm-antibiotics2022

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Code to reproduce Münch et al. 2022 Manuscript "Pulsed antibiotic treatments of gnotobiotic mice manifests in complex community dynamics and resistance effects"

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