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    11 repositories

    • AskErin_DearBeth

      Public
      Files related to Ask Erin/Dear Beth episodes - now available on a YouTube near You!
      sed
      •
      BSD 3-Clause "New" or "Revised" License
      •0•4•0•0•Updated Aug 12, 2026Aug 12, 2026

    • developing-intuitions

      Public
      A repo for deploying marimo WebAssembly notebooks to GitHub Pages
      Python
      •
      Apache License 2.0
      •120•0•0•0•Updated Jul 23, 2026Jul 23, 2026

    • sqy2h-screen-quantification

      Public
      Image-analysis workflow for composite plate registration, grid fitting, and colony segmentation and quantification in semi-quantitative yeast-2-hybrid screens.
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Jul 16, 2026Jul 16, 2026

    • GuideToCellPainting

      Public
      Overview of resources for biologists interested in Cell Painting. Covers introduction, application, modification, image analysis, profile generation, biology ex…
      SCSS
      •
      Creative Commons Attribution 4.0 International
      •1•0•0•0•Updated Jun 5, 2026Jun 5, 2026

    • ciminilab-swe-test

      Public
      Take home swe assessment
      JavaScript
      •0•0•0•0•Updated Apr 10, 2026Apr 10, 2026

    • 2026_Moser_Hamid_JMic

      Public
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•0•0•Updated Dec 17, 2025Dec 17, 2025

    • WeMakeStuff

      Public
      A meta-listing of software, training resources, and more from the Cimini Lab at the Broad Institute Imaging Platform
      0•0•1•0•Updated Nov 6, 2025Nov 6, 2025

    • GoogleSummerOfCode

      Public
      Google Summer of Code Projects for the Cimini Lab, Broad Institute Imaging Platform
      SCSS
      •0•1•0•1•Updated Mar 4, 2025Mar 4, 2025

    • 2024_PostdocProgram

      Public
      Figure generation code and files for Cimini et al postdoc program paper
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •1•1•0•0•Updated Jun 25, 2024Jun 25, 2024

    • 2023_Garcia-Fossa_Cruz_CurrentProtocols

      Public
      Scripts for Current Protocols paper
      Jupyter Notebook
      •
      Creative Commons Zero v1.0 Universal
      •2•6•3•0•Updated Jun 26, 2023Jun 26, 2023

    • 2021_Jamali_BiologicalImaging

      Public
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •1•1•0•0•Updated Nov 14, 2022Nov 14, 2022
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