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Pull requests: nf-core/epitopeprediction

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Pull requests list

feat: replace epytope/BioMart variant path with offline VEP + pVACtools
#362 opened Jul 9, 2026 by axelwalter Contributor Loading…
5 of 11 tasks
Switch MERGE_PREDICTIONS → SUMMARIZE_RESULTS intermediate to Parquet
#356 opened May 23, 2026 by jonasscheid Collaborator Loading…
3 of 11 tasks
Add allele chunking and pan-HLA prediction support
#341 opened Mar 5, 2026 by jonasscheid Collaborator Loading…
6 of 11 tasks
Add MixMHCpred and MixMHCIIpred binding predictors
#338 opened Feb 27, 2026 by jonasscheid Collaborator Draft
5 of 11 tasks
Add --speclib_output for spectral library generation via AlphaPeptDeep
#335 opened Feb 23, 2026 by jonasscheid Collaborator Draft
5 of 13 tasks
ProTip! What’s not been updated in a month: updated:<2026-08-14.