All issues

Search results

plugin-cache: query all canonical-equivalent tabix contigs

bugSomething isn't workingSomething isn't working

rustPull requests that update rust codePull requests that update rust code

Status: Open.

#219 In biodatageeks/datafusion-bio-functions;

· mwiewior opened on Aug 27, 2026

Emit Ensembl cache data-source versions in the output header provenance

Status: Open.

#213 In biodatageeks/datafusion-bio-functions;

· mwiewior opened on Aug 23, 2026

perf(vep): find the source of per-worker CPU amplification in the grid path (~69% unexplained)

Status: Open.

#207 In biodatageeks/datafusion-bio-functions;

· mwiewior opened on Aug 1, 2026

FastQC: follow-up improvements after the dup/overrepresented memory fix (#182)

Status: Open.

#183 In biodatageeks/datafusion-bio-functions;

· mwiewior opened on Jul 3, 2026

Follow up on VEP pick-mode review nits

Status: Open.

#161 In biodatageeks/datafusion-bio-functions;

· mwiewior opened on May 18, 2026

annotate_vep(..., merged=true) omits merged-only columns from table-function/DataFrame schema

Status: Open.

#149 In biodatageeks/datafusion-bio-functions;

· mwiewior opened on Apr 25, 2026

cluster(): partitioned execution can hang because output streams wait for all partitions

Status: Open.

#147 In biodatageeks/datafusion-bio-functions;

· mwiewior opened on Apr 23, 2026

Match VEP buffer-scoped HGNC_ID propagation for merged RefSeq

Status: Open.

#143 In biodatageeks/datafusion-bio-functions;

· mwiewior opened on Apr 13, 2026

Domains issue

VEP-mismatch

Status: Open.

#138 In biodatageeks/datafusion-bio-functions;

· mwiewior opened on Apr 8, 2026

inframe_insertion classified instead of protein_altering_variant for complex CDS-boundary insertions

VEP-mismatch

Status: Open.

#120 In biodatageeks/datafusion-bio-functions;

· mwiewior opened on Apr 6, 2026

start_retained_variant missing alongside start_lost for frameshifts and CDS-boundary deletions

VEP-mismatch

Status: Open.

#119 In biodatageeks/datafusion-bio-functions;

· mwiewior opened on Apr 6, 2026

stop_lost falsely added to frameshift_variant when frameshift extends past original stop codon

VEP-mismatch

Status: Open.

#115 In biodatageeks/datafusion-bio-functions;

· mwiewior opened on Apr 6, 2026