Allow FlexiChains 0.7 - #935
Closed
seabbs-bot wants to merge 1 commit into
Closed
Conversation
Contributor
Try this Pull Request!Option 1: Julia Package ManagerOpen Julia and type: import Pkg
Pkg.activate(temp=true)
Pkg.add(url="https://github.com/EpiAware/CensoredDistributions.jl", rev="flexichains-0.7-compat")
using CensoredDistributionsOption 2: Local CheckoutIf you have the repo locally: git checkout flexichains-0.7-compat
julia --project=. -e "using Pkg; Pkg.instantiate()" |
Codecov Report✅ All modified and coverable lines are covered by tests.
Flags with carried forward coverage won't be shown. Click here to find out more. 🚀 New features to boost your workflow:
|
Contributor
|
📖 Documentation preview is ready! View the docs for this PR at: https://EpiAware.github.io/CensoredDistributions.jl/previews/PR935/ This preview will be updated automatically when you push new commits. |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
This is entirely from an agent so do not review until I have pinged for review as I will do a first pass
Widens the FlexiChains weakdep compat to include 0.7.
Needed so CensoredDistributions can resolve alongside FlexiChains 0.7 (the
v0.7branch of JuliaBayes/FlexiChains.jl, pinned by Wren.jl via a sources entry), where versions above 0.2.11 are otherwise excluded. Staying on 0.2.11 loses the delay tail-derivative fixes: it gives finite log densities but NaN gradients for far-tail interval-censored observations, which kills NUTS warmup.FlexiChains sits in [weakdeps] purely for compat bounding (there is no FlexiChains extension), so the validation available at this level is co-resolution and precompilation: a fresh environment with this branch dev'd plus FlexiChains at rev v0.7 resolves (co-resolving FlexiChains 0.7.0) and precompiles, while the unwidened bound is unsatisfiable.
This was opened by a bot. Please ping @seabbs for any questions.