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Package: CycleMix
Version: 0.99.04
Date: 2018-06-18
Title: Cell-Cycle using Mixture Models
Authors@R: person(given="Tallulah", family="Andrews",
role=c("aut", "cre"),
email="tallulandrews@gmail.com",
comment=c(ORCID="0000-0003-1120-2196"))
Depends: R (>= 3.5.0)
Imports: mclust, SummarizedExperiment, matrixStats, MASS, Seurat, Matrix, biomaRt, SeuratObject, RcppAnnoy, future, future.apply, methods
Suggests: knitr, rmarkdown, BiocStyle, SingleCellExperiment
VignetteBuilder: knitr
biocViews: RNASeq, Sequencing, Transcriptomics, GeneExpression, Software
Collate: Ensembl_Stuff.R Analysis.R Plotting.R
LazyData: true
LazyDataCompression: xz
Description: This package uses mixture models to assign cells to different stages of the cell-cycle and has a flexible regression model to remove the effect of one or more cell-cycle stages.
URL: https://github.com/tallulandrews/CycleMix
BugReports: https://github.com/tallulandrews/CycleMix/issues
Encoding: UTF-8
License: GPL-3