DESCRIPTION

Package: mzR
Type: Package
Title: parser for netCDF, mzXML and mzML and mzIdentML files
       (mass spectrometry data)
Version: 2.45.3
Author: Bernd Fischer, Steffen Neumann, Laurent Gatto, Qiang Kou, Johannes Rainer
Authors@R: c(
    person("Steffen", "Neumann", email="sneumann@ipb-halle.de", role=c("aut","cre")),
    person("Laurent", "Gatto", email="laurent.gatto@uclouvain.be", role=c("aut")),
    person("Qiakng", "Kou", email="qkou@umail.iu.edu", role=c("aut")),
    person("David","Rauh",email="drauh@ipb-halle.de", role=c("ctb")),
    person("Sascha","Manier",email="sascha.manier@uni-saarland.de", role=c("ctb")),
    person(given = "Adriano",
           family = "Rutz",
           email = "adafede@gmail.com",
           role = c("ctb"),
           comment = c(ORCID = "0000-0003-0443-9902")),
    person(given = "Johannes", family = "Rainer",
           email = "Johannes.Rainer@eurac.edu",
           role = "aut",
           comment = c(ORCID = "0000-0002-6977-7147"))
    )
Description: mzR provides a unified API to the common file formats and
        parsers available for mass spectrometry data. It comes with a
        subset of the proteowizard library for mzXML, mzML and mzIdentML.
        The netCDF reading code has previously been used in XCMS.
License: Artistic-2.0
LazyLoad: yes
Depends:
    R (>= 4.0.0),
    Rcpp (>= 0.10.1),
    methods,
    utils
Imports:
    Biobase,
    BiocGenerics (>= 0.13.6),
    ProtGenerics (>= 1.17.3),
    ncdf4
Suggests:
    MsDataHub,
    RUnit,
    mzID,
    BiocStyle (>= 2.5.19),
    knitr,
    XML,
    rmarkdown
VignetteBuilder: knitr
LinkingTo:
    Rcpp,
    Rhdf5lib (>= 1.1.4)
RcppModules:
    Pwiz,
    Ident
SystemRequirements: C++11, GNU make
URL: https://github.com/sneumann/mzR/
BugReports: https://github.com/sneumann/mzR/issues/
biocViews: ImmunoOncology, Infrastructure, DataImport, Proteomics, Metabolomics,
        MassSpectrometry
RoxygenNote: 7.3.3