Merge branch 'main' into move-coveragerc-to-pyproject

Author: mhucka

check/mypy

@@ -14,7 +14,7 @@
 # limitations under the License.
 
 ################################################################################
-# Runs mypy on the repository using a preconfigured mypy.ini file.
+# Runs mypy on the repository starting from the root.
 #
 # Usage:
 #     check/mypy [--flags]
@@ -25,7 +25,7 @@ cd "$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )" || exit 1
 cd "$(git rev-parse --show-toplevel)" || exit 1
 
 echo -e -n "\033[31m"
-mypy --config-file=dev_tools/conf/mypy.ini "$@" .
+mypy "$@" .
 result=$?
 echo -e -n "\033[0m"
 

dev_tools/conf/mypy.ini

@@ -30,3 +30,43 @@ omit = [
     "./profiling/performance_benchmarks.py",
     "./dev_tools/*",
 ]
+
+[tool.mypy]
+implicit_optional = true
+
+# TODO: this is temporary for 1.7.0 release. Remove this & fix the errors.
+ignore_errors = true
+
+[[tool.mypy.overrides]]
+module = "__main__"
+follow_imports = "silent"
+ignore_missing_imports = true
+
+[[tool.mypy.overrides]]
+module = [
+    "_pytest.*",
+    "absl",
+    "apiclient.*",
+    "h5py",
+    "numpy.*",
+    "pubchempy",
+    "pybtas",
+    "pyscf.*",
+    "pytest.*",
+    "scipy.*",
+    "tensorflow_docs",
+]
+follow_imports = "silent"
+ignore_missing_imports = true
+
+[[tool.mypy.overrides]]
+module = "sympy.*"
+ignore_missing_imports = true
+
+[[tool.mypy.overrides]]
+module = "tensorflow_docs.*"
+ignore_missing_imports = true
+
+[[tool.mypy.overrides]]
+module = "deprecation"
+follow_untyped_imports = true