Re-pip-compile all requirements files

Author: mhucka

dev_tools/requirements/envs/dev.env.txt

@@ -4,86 +4,90 @@
 #
 #    pip-compile --output-file=envs/dev.env.txt deps/format.txt deps/mypy.txt deps/pip-tools.txt deps/pylint.txt deps/pytest.txt deps/resource_estimates_runtime.txt deps/runtime.txt
 #
-ase==3.25.0
+ase==3.27.0
     # via -r deps/resource_estimates_runtime.txt
-astroid==3.3.10
+astroid==3.3.11
     # via pylint
-attrs==25.3.0
+attrs==25.4.0
     # via
     #   cirq-core
     #   jsonschema
     #   referencing
-black==25.1.0
+backports-asyncio-runner==1.2.0
+    # via pytest-asyncio
+black==26.1.0
     # via -r deps/format.txt
-build==1.2.2.post1
+build==1.4.0
     # via pip-tools
-certifi==2025.4.26
+certifi==2026.1.4
     # via requests
-charset-normalizer==3.4.2
+charset-normalizer==3.4.4
     # via requests
 cirq-core==1.5.0
     # via -r deps/runtime.txt
-click==8.2.1
+click==8.3.1
     # via
     #   black
     #   pip-tools
 contourpy==1.3.2
     # via matplotlib
-coverage[toml]==7.8.2
+coverage[toml]==7.13.4
     # via pytest-cov
 cycler==0.12.1
     # via matplotlib
 deprecation==2.1.0
     # via -r deps/runtime.txt
-dill==0.4.0
+dill==0.4.1
     # via pylint
 duet==0.2.9
     # via cirq-core
-exceptiongroup==1.3.0
+exceptiongroup==1.3.1
     # via pytest
-execnet==2.1.1
+execnet==2.1.2
     # via pytest-xdist
-fastjsonschema==2.21.1
+fastjsonschema==2.21.2
     # via nbformat
-fonttools==4.58.1
+fonttools==4.61.1
     # via matplotlib
-h5py==3.13.0
+h5py==3.15.1
     # via
     #   -r deps/runtime.txt
     #   pyscf
-idna==3.10
+idna==3.11
     # via requests
-iniconfig==2.1.0
+iniconfig==2.3.0
     # via pytest
-isort==6.0.1
+isort==6.1.0
     # via pylint
 jax==0.4.38
     # via -r deps/resource_estimates_runtime.txt
 jaxlib==0.4.38
     # via
     #   -r deps/resource_estimates_runtime.txt
     #   jax
-jsonschema==4.24.0
+jsonschema==4.26.0
     # via nbformat
-jsonschema-specifications==2025.4.1
+jsonschema-specifications==2025.9.1
     # via jsonschema
-jupyter-core==5.8.1
+jupyter-core==5.9.1
     # via nbformat
-kiwisolver==1.4.8
+kiwisolver==1.4.9
     # via matplotlib
-matplotlib==3.10.3
+librt==0.8.1
+    # via mypy
+matplotlib==3.10.8
     # via
     #   ase
     #   cirq-core
 mccabe==0.7.0
     # via pylint
-ml-dtypes==0.5.1
+ml-dtypes==0.5.4
     # via
     #   jax
     #   jaxlib
 mpmath==1.3.0
     # via sympy
-mypy==1.16.0
+mypy==1.19.1
     # via -r deps/mypy.txt
 mypy-extensions==1.1.0
     # via
@@ -113,71 +117,76 @@ numpy==2.2.6
     #   types-networkx
 opt-einsum==3.4.0
     # via jax
-packaging==25.0
+packaging==26.0
     # via
     #   black
     #   build
     #   deprecation
     #   matplotlib
     #   pytest
-pandas==2.2.3
+    #   wheel
+pandas==2.3.3
     # via cirq-core
-pandas-stubs==2.2.3.250527
+pandas-stubs==2.3.3.260113
     # via -r deps/mypy.txt
-pathspec==0.12.1
+pathspec==1.0.4
     # via
     #   black
     #   mypy
-pillow==11.2.1
+pillow==12.1.1
     # via matplotlib
-pip-tools==7.4.1
+pip-tools==7.5.3
     # via -r deps/pip-tools.txt
-platformdirs==4.3.8
+platformdirs==4.9.2
     # via
     #   black
     #   jupyter-core
     #   pylint
 pluggy==1.6.0
-    # via pytest
-pubchempy==1.0.4
+    # via
+    #   pytest
+    #   pytest-cov
+pubchempy==1.0.5
     # via -r deps/runtime.txt
-pygments==2.19.1
+pygments==2.19.2
     # via pytest
-pylint==3.3.7
+pylint==3.3.9
     # via -r deps/pylint.txt
-pyparsing==3.2.3
+pyparsing==3.3.2
     # via matplotlib
 pyproject-hooks==1.2.0
     # via
     #   build
     #   pip-tools
-pyscf==2.9.0
+pyscf==2.12.1
     # via -r deps/resource_estimates_runtime.txt
-pytest==8.4.0
+pytest==9.0.2
     # via
     #   -r deps/pytest.txt
     #   pytest-asyncio
     #   pytest-cov
     #   pytest-xdist
-pytest-asyncio==1.0.0
+pytest-asyncio==1.3.0
     # via -r deps/pytest.txt
-pytest-cov==6.1.1
+pytest-cov==7.0.0
     # via -r deps/pytest.txt
-pytest-xdist==3.7.0
+pytest-xdist==3.8.0
     # via -r deps/pytest.txt
 python-dateutil==2.9.0.post0
     # via
     #   matplotlib
     #   pandas
+pytokens==0.4.1
+    # via black
 pytz==2025.2
     # via pandas
-referencing==0.36.2
+referencing==0.37.0
     # via
     #   jsonschema
     #   jsonschema-specifications
-requests==2.32.3
+requests==2.32.5
     # via -r deps/runtime.txt
-rpds-py==0.25.1
+rpds-py==0.30.0
     # via
     #   jsonschema
     #   referencing
@@ -197,7 +206,7 @@ sympy==1.14.0
     # via
     #   -r deps/runtime.txt
     #   cirq-core
-tomli==2.2.1
+tomli==2.4.0
     # via
     #   black
     #   build
@@ -206,37 +215,38 @@ tomli==2.2.1
     #   pip-tools
     #   pylint
     #   pytest
-tomlkit==0.13.2
+tomlkit==0.14.0
     # via pylint
-tqdm==4.67.1
+tqdm==4.67.3
     # via cirq-core
 traitlets==5.14.3
     # via
     #   jupyter-core
     #   nbformat
-types-networkx==3.5.0.20250531
+types-networkx==3.6.1.20260210
     # via -r deps/mypy.txt
-types-pytz==2025.2.0.20250516
+types-pytz==2025.2.0.20251108
     # via pandas-stubs
-types-requests==2.32.0.20250602
+types-requests==2.32.4.20260107
     # via -r deps/mypy.txt
-types-setuptools==80.9.0.20250529
+types-setuptools==82.0.0.20260210
     # via -r deps/mypy.txt
-typing-extensions==4.14.0
+typing-extensions==4.15.0
     # via
     #   astroid
     #   black
     #   cirq-core
     #   exceptiongroup
     #   mypy
+    #   pytest-asyncio
     #   referencing
-tzdata==2025.2
+tzdata==2025.3
     # via pandas
-urllib3==2.4.0
+urllib3==2.6.3
     # via
     #   requests
     #   types-requests
-wheel==0.45.1
+wheel==0.46.3
     # via pip-tools
 
 # The following packages are considered to be unsafe in a requirements file: