Re-pip-compile all requirements files (#1204)

This PR updates some dependencies as well as the scripts used to produce
the various environment files, and updates the environment files
themselves.

* `dev_tools/requirements/deps/runtime.txt` needs to set some
constraints on versions of some dependencies because higher versions of
those dependencies require Python 3.11, which is incompatible with our
goal of maintaining Python 3.10 compatibility (for now)
* `dev_tools/requirements/re-pip-compile-in-docker.sh` needed an
addition to prevent it including a certain Python package that is
incompatible with Python 3.11+
* `dev_tools/requirements/Dockerfile` didn't do a `pip update -U pip`,
but should; while at it, I added some options to pip to silence
irrelevant warnings so that the logs are less noisy

Note to reviewers: all of the `.txt` requirements files under
`dev_tools/requirements/envs/` and `dev_tools/requirements/max_compat/`
are solely the output of running
`dev_tools/requirements/re-pip-compile-in-docker.sh`.

Author: mhucka

dev_tools/requirements/Dockerfile

@@ -19,11 +19,14 @@ WORKDIR /pip-compile
 
 # Step 0: install pip-tools
 COPY envs/pip-tools.env.txt ./
-RUN pip install -r pip-tools.env.txt
+
+# hadolint global ignore=DL3013
+RUN pip install -U pip --no-cache-dir --root-user-action ignore && \
+    pip install -r pip-tools.env.txt --no-cache-dir --root-user-action ignore
 
 # Step 1: compile a complete & consistent environment with all dependencies
 COPY deps/ ./deps/
 COPY run-pip-compiles.py ./
 
 ARG PLATFORM="default"
-RUN python run-pip-compiles.py --platform $PLATFORM
+RUN python run-pip-compiles.py --platform $PLATFORM

dev_tools/requirements/deps/runtime.txt

@@ -1,4 +1,4 @@
-cirq-core>=1.4.1
+cirq-core>=1.4.1,<1.6.0
 deprecation
 h5py>=3.10.0
 networkx
@@ -9,3 +9,13 @@ requests~=2.32.2
 scipy~=1.15
 
 sympy
+
+# Transitive dependency. Versions 1.3.3+ require Python 311. Constraining it
+# lets us produce a single set of requirements files for Python 3.10 - 3.12.
+contourpy<1.3.3
+
+# Another transitive dependency. We don't care about the version of this
+# backport because it's only needed for a pytest extension. However, because we
+# run pip-compile in Python 3.10 for maximum compatibility, we need to add an
+# explicit constraint to keep this package out of the requirements files.
+backports-asyncio-runner ; python_full_version < '3.11'

dev_tools/requirements/envs/dev.env.txt

@@ -4,86 +4,94 @@
 #
 #    pip-compile --output-file=envs/dev.env.txt deps/format.txt deps/mypy.txt deps/pip-tools.txt deps/pylint.txt deps/pytest.txt deps/resource_estimates_runtime.txt deps/runtime.txt
 #
-ase==3.25.0
+ase==3.27.0
     # via -r deps/resource_estimates_runtime.txt
-astroid==3.3.10
+astroid==3.3.11
     # via pylint
-attrs==25.3.0
+attrs==25.4.0
     # via
     #   cirq-core
     #   jsonschema
     #   referencing
+backports-asyncio-runner==1.2.0 ; python_full_version < "3.11"
+    # via
+    #   -r deps/runtime.txt
+    #   pytest-asyncio
 black==26.3.1
     # via -r deps/format.txt
-build==1.2.2.post1
+build==1.4.0
     # via pip-tools
-certifi==2025.4.26
+certifi==2026.2.25
     # via requests
-charset-normalizer==3.4.2
+charset-normalizer==3.4.5
     # via requests
 cirq-core==1.5.0
     # via -r deps/runtime.txt
-click==8.2.1
+click==8.3.1
     # via
     #   black
     #   pip-tools
 contourpy==1.3.2
-    # via matplotlib
-coverage[toml]==7.8.2
+    # via
+    #   -r deps/runtime.txt
+    #   matplotlib
+coverage[toml]==7.13.4
     # via pytest-cov
 cycler==0.12.1
     # via matplotlib
 deprecation==2.1.0
     # via -r deps/runtime.txt
-dill==0.4.0
+dill==0.4.1
     # via pylint
 duet==0.2.9
     # via cirq-core
-exceptiongroup==1.3.0
+exceptiongroup==1.3.1
     # via pytest
-execnet==2.1.1
+execnet==2.1.2
     # via pytest-xdist
-fastjsonschema==2.21.1
+fastjsonschema==2.21.2
     # via nbformat
-fonttools==4.58.1
+fonttools==4.62.0
     # via matplotlib
-h5py==3.13.0
+h5py==3.16.0
     # via
     #   -r deps/runtime.txt
     #   pyscf
-idna==3.10
+idna==3.11
     # via requests
-iniconfig==2.1.0
+iniconfig==2.3.0
     # via pytest
-isort==6.0.1
+isort==6.1.0
     # via pylint
 jax==0.4.38
     # via -r deps/resource_estimates_runtime.txt
 jaxlib==0.4.38
     # via
     #   -r deps/resource_estimates_runtime.txt
     #   jax
-jsonschema==4.24.0
+jsonschema==4.26.0
     # via nbformat
-jsonschema-specifications==2025.4.1
+jsonschema-specifications==2025.9.1
     # via jsonschema
-jupyter-core==5.8.1
+jupyter-core==5.9.1
     # via nbformat
-kiwisolver==1.4.8
+kiwisolver==1.5.0
     # via matplotlib
-matplotlib==3.10.3
+librt==0.8.1
+    # via mypy
+matplotlib==3.10.8
     # via
     #   ase
     #   cirq-core
 mccabe==0.7.0
     # via pylint
-ml-dtypes==0.5.1
+ml-dtypes==0.5.4
     # via
     #   jax
     #   jaxlib
 mpmath==1.3.0
     # via sympy
-mypy==1.16.0
+mypy==1.19.1
     # via -r deps/mypy.txt
 mypy-extensions==1.1.0
     # via
@@ -113,71 +121,76 @@ numpy==2.2.6
     #   types-networkx
 opt-einsum==3.4.0
     # via jax
-packaging==25.0
+packaging==26.0
     # via
     #   black
     #   build
     #   deprecation
     #   matplotlib
     #   pytest
-pandas==2.2.3
+    #   wheel
+pandas==2.3.3
     # via cirq-core
-pandas-stubs==2.2.3.250527
+pandas-stubs==2.3.3.260113
     # via -r deps/mypy.txt
-pathspec==0.12.1
+pathspec==1.0.4
     # via
     #   black
     #   mypy
-pillow==11.2.1
+pillow==12.1.1
     # via matplotlib
-pip-tools==7.4.1
+pip-tools==7.5.3
     # via -r deps/pip-tools.txt
-platformdirs==4.3.8
+platformdirs==4.9.4
     # via
     #   black
     #   jupyter-core
     #   pylint
 pluggy==1.6.0
-    # via pytest
-pubchempy==1.0.4
+    # via
+    #   pytest
+    #   pytest-cov
+pubchempy==1.0.5
     # via -r deps/runtime.txt
-pygments==2.19.1
+pygments==2.19.2
     # via pytest
-pylint==3.3.7
+pylint==3.3.9
     # via -r deps/pylint.txt
-pyparsing==3.2.3
+pyparsing==3.3.2
     # via matplotlib
 pyproject-hooks==1.2.0
     # via
     #   build
     #   pip-tools
-pyscf==2.9.0
+pyscf==2.12.1
     # via -r deps/resource_estimates_runtime.txt
-pytest==8.4.0
+pytest==9.0.2
     # via
     #   -r deps/pytest.txt
     #   pytest-asyncio
     #   pytest-cov
     #   pytest-xdist
-pytest-asyncio==1.0.0
+pytest-asyncio==1.3.0
     # via -r deps/pytest.txt
-pytest-cov==6.1.1
+pytest-cov==7.0.0
     # via -r deps/pytest.txt
-pytest-xdist==3.7.0
+pytest-xdist==3.8.0
     # via -r deps/pytest.txt
 python-dateutil==2.9.0.post0
     # via
     #   matplotlib
     #   pandas
-pytz==2025.2
+pytokens==0.4.1
+    # via black
+pytz==2026.1.post1
     # via pandas
-referencing==0.36.2
+referencing==0.37.0
     # via
     #   jsonschema
     #   jsonschema-specifications
-requests==2.32.3
+requests==2.32.5
     # via -r deps/runtime.txt
-rpds-py==0.25.1
+rpds-py==0.30.0
     # via
     #   jsonschema
     #   referencing
@@ -197,7 +210,7 @@ sympy==1.14.0
     # via
     #   -r deps/runtime.txt
     #   cirq-core
-tomli==2.2.1
+tomli==2.4.0
     # via
     #   black
     #   build
@@ -206,37 +219,38 @@ tomli==2.2.1
     #   pip-tools
     #   pylint
     #   pytest
-tomlkit==0.13.2
+tomlkit==0.14.0
     # via pylint
-tqdm==4.67.1
+tqdm==4.67.3
     # via cirq-core
 traitlets==5.14.3
     # via
     #   jupyter-core
     #   nbformat
-types-networkx==3.5.0.20250531
+types-networkx==3.6.1.20260303
     # via -r deps/mypy.txt
-types-pytz==2025.2.0.20250516
+types-pytz==2026.1.1.20260304
     # via pandas-stubs
-types-requests==2.32.0.20250602
+types-requests==2.32.4.20260107
     # via -r deps/mypy.txt
-types-setuptools==80.9.0.20250529
+types-setuptools==82.0.0.20260210
     # via -r deps/mypy.txt
-typing-extensions==4.14.0
+typing-extensions==4.15.0
     # via
     #   astroid
     #   black
     #   cirq-core
     #   exceptiongroup
     #   mypy
+    #   pytest-asyncio
     #   referencing
-tzdata==2025.2
+tzdata==2025.3
     # via pandas
-urllib3==2.4.0
+urllib3==2.6.3
     # via
     #   requests
     #   types-requests
-wheel==0.45.1
+wheel==0.46.3
     # via pip-tools
 
 # The following packages are considered to be unsafe in a requirements file: