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test_api.py
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import io
import os
from unittest.mock import MagicMock, patch
import pydicom
import pytest
from django.core.files.uploadedfile import SimpleUploadedFile
from ninja.testing import TestClient
from manage_breast_screening.core.api import api
from manage_breast_screening.dicom.models import Study
from manage_breast_screening.gateway.models import GatewayActionStatus
from manage_breast_screening.gateway.tests.factories import GatewayActionFactory
from manage_breast_screening.participants.models.appointment import (
AppointmentStatusNames,
)
from manage_breast_screening.participants.tests.factories import AppointmentFactory
os.environ["NINJA_SKIP_REGISTRY"] = "yes"
client = TestClient(api)
@pytest.fixture
def dicom_file(dataset) -> bytes:
with io.BytesIO() as buffer:
pydicom.dcmwrite(buffer, dataset, enforce_file_format=True)
buffer.seek(0)
return SimpleUploadedFile(
"temp.dcm", buffer.read(), content_type="application/dicom"
)
@pytest.fixture
def appointment_stub():
return AppointmentFactory.stub(
is_in_progress=MagicMock(return_value=True),
)
@pytest.mark.django_db
def test_upload_success(dataset, dicom_file, monkeypatch):
monkeypatch.setenv("API_ENABLED", "true")
monkeypatch.setenv("API_AUTH_TOKEN", "testtoken")
appointment = AppointmentFactory(current_status=AppointmentStatusNames.IN_PROGRESS)
with patch(
"manage_breast_screening.dicom.dicom_recorder.lookup_appointment",
return_value=appointment,
):
response = client.put(
f"/dicom/{appointment.pk}",
FILES={"file": dicom_file},
headers={"Authorization": "Bearer " + os.getenv("API_AUTH_TOKEN", "")},
)
assert response.status_code == 201
json = response.json()
study = Study.objects.last()
assert json["study_instance_uid"] == dataset.StudyInstanceUID
assert json["series_instance_uid"] == dataset.SeriesInstanceUID
assert json["sop_instance_uid"] == dataset.SOPInstanceUID
assert json["instance_id"] == str(study.images().first().id)
assert study.source_message_id == str(appointment.pk)
def test_upload_no_file(monkeypatch):
monkeypatch.setenv("API_ENABLED", "true")
monkeypatch.setenv("API_AUTH_TOKEN", "testtoken")
response = client.put(
"/dicom/abc123",
FILES={"file": None},
headers={"Authorization": "Bearer " + os.getenv("API_AUTH_TOKEN", "")},
)
assert response.status_code == 422
def test_upload_invalid_file(monkeypatch, appointment_stub):
monkeypatch.setenv("API_ENABLED", "true")
monkeypatch.setenv("API_AUTH_TOKEN", "testtoken")
invalid_file = SimpleUploadedFile(
"invalid.dcm", b"not a dicom file", content_type="application/dicom"
)
with patch(
"manage_breast_screening.dicom.dicom_recorder.lookup_appointment",
return_value=appointment_stub,
):
response = client.put(
"/dicom/abc123",
FILES={"file": invalid_file},
headers={"Authorization": "Bearer " + os.getenv("API_AUTH_TOKEN", "")},
)
assert response.status_code == 400
assert response.json()["title"] == "Invalid DICOM file"
assert response.json()["status"] == 400
assert response.json()["detail"] == "The uploaded file is not a valid DICOM file."
def test_upload_file_thats_too_large(monkeypatch):
monkeypatch.setenv("API_ENABLED", "true")
monkeypatch.setenv("API_AUTH_TOKEN", "testtoken")
invalid_file = MagicMock(spec=SimpleUploadedFile, size=101 * 1024 * 1024)
response = client.put(
"/dicom/abc123",
FILES={"file": invalid_file},
headers={"Authorization": "Bearer " + os.getenv("API_AUTH_TOKEN", "")},
)
assert response.status_code == 400
assert response.json()["title"] == "File too large"
assert response.json()["status"] == 400
assert response.json()["detail"] == "The file cannot be larger than 100MB"
def test_upload_missing_uids(dataset, monkeypatch, appointment_stub):
monkeypatch.setenv("API_ENABLED", "true")
monkeypatch.setenv("API_AUTH_TOKEN", "testtoken")
del dataset.StudyInstanceUID
del dataset.SeriesInstanceUID
del dataset.SOPInstanceUID
with io.BytesIO() as buffer:
pydicom.dcmwrite(buffer, dataset, enforce_file_format=True)
buffer.seek(0)
dicom_file = SimpleUploadedFile(
"temp.dcm", buffer.read(), content_type="application/dicom"
)
with patch(
"manage_breast_screening.dicom.dicom_recorder.lookup_appointment",
return_value=appointment_stub,
):
response = client.put(
"/dicom/abc123",
FILES={"file": dicom_file},
headers={"Authorization": "Bearer " + os.getenv("API_AUTH_TOKEN", "")},
)
assert response.status_code == 400
assert response.json()["title"] == "Missing DICOM attributes"
assert response.json()["status"] == 400
assert (
response.json()["detail"]
== "The DICOM file is missing required UID attributes."
)
def test_upload_appointment_not_in_progress(dicom_file, monkeypatch, appointment_stub):
monkeypatch.setenv("API_ENABLED", "true")
monkeypatch.setenv("API_AUTH_TOKEN", "testtoken")
appointment_stub.is_in_progress.return_value = False
with patch(
"manage_breast_screening.dicom.dicom_recorder.lookup_appointment",
return_value=appointment_stub,
):
response = client.put(
"/dicom/abc123",
FILES={"file": dicom_file},
headers={"Authorization": "Bearer " + os.getenv("API_AUTH_TOKEN", "")},
)
assert response.status_code == 500
assert response.json()["title"] == "Internal Server Error"
@pytest.mark.django_db
def test_upload_when_api_disabled(dicom_file, monkeypatch):
monkeypatch.setenv("API_ENABLED", "false")
monkeypatch.setenv("API_AUTH_TOKEN", "testtoken")
response = client.put(
"/dicom/abc123",
FILES={"file": dicom_file},
headers={"Authorization": "Bearer " + os.getenv("API_AUTH_TOKEN", "")},
)
assert response.status_code == 403
assert response.json()["status"] == "API is not available"
@pytest.mark.django_db
def test_upload_no_auth(dicom_file):
response = client.put(
"/dicom/abc123",
FILES={"file": dicom_file},
)
assert response.status_code == 401
assert response.json() == {
"detail": "Unauthorized",
}
@pytest.mark.django_db
def test_report_failure(monkeypatch):
monkeypatch.setenv("API_ENABLED", "true")
monkeypatch.setenv("API_AUTH_TOKEN", "testtoken")
action = GatewayActionFactory()
response = client.patch(
f"/dicom/{action.id}/failure",
json={"error": "Missing PatientID"},
headers={"Authorization": "Bearer testtoken"},
)
assert response.status_code == 200
assert response.json()["status"] == "failure recorded"
action.refresh_from_db()
assert action.status == GatewayActionStatus.IMAGE_FAILED
assert action.last_error == "Missing PatientID"
assert action.failed_at is not None
@pytest.mark.django_db
def test_report_failure_action_not_found(monkeypatch):
monkeypatch.setenv("API_ENABLED", "true")
monkeypatch.setenv("API_AUTH_TOKEN", "testtoken")
response = client.patch(
"/dicom/00000000-0000-0000-0000-000000000000/failure",
json={"error": "Missing PatientID"},
headers={"Authorization": "Bearer testtoken"},
)
assert response.status_code == 404
assert response.json()["title"] == "Not Found"